Reliable Detection and Repair of Metadata Corruption

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(New page: == Reliable Detection and Repair of Metadata Corruption == This can be broken down into specific phases. Firstly, we cannot repair a corruption we have not detected. Hence the first th...)
 
 
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= Future Directions - Reliability =
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From http://oss.sgi.com/archives/xfs/2008-09/msg00802.html
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== Reliable Detection and Repair of Metadata Corruption ==
 
== Reliable Detection and Repair of Metadata Corruption ==
  

Latest revision as of 16:05, 12 April 2016

Contents

[edit] Future Directions - Reliability

From http://oss.sgi.com/archives/xfs/2008-09/msg00802.html

[edit] Reliable Detection and Repair of Metadata Corruption

This can be broken down into specific phases. Firstly, we cannot repair a corruption we have not detected. Hence the first thing we need to do is reliable detection of errors and corruption. Once we can reliably detect errors in structures and verified that we are propagating all the errors reported from lower layers into XFS correctly, we can look at ways of handling them more robustly. In many cases, the same type of error needs to be handled differently due to the context in which the error occurs. This introduces extra complexity into this problem.

Rather than continually refering to specific types of problems (such as corruption or error handling) I'll refer to them as 'exceptions'. This avoids thinking about specific error conditions through specific paths and so helps us to look at the issues from a more general or abstract point of view.

[edit] Exception Detection

Our current approach to exception detection is entirely reactive and rather slapdash - we read a metadata block from disk and check certain aspects of it (e.g. the magic number) to determine if it is the block we wanted. We have no way of verifying that it is the correct block of metadata of the type we were trying to read; just that it is one of that specific type. We do bounds checking on critical fields, but this can't detect bit errors in those fields. There's many fields we don't even bother to check because the range of valid values are not limited.

Effectively, this can be broken down into three separate areas:

- ensuring what we've read is exactly what we wrote - ensuring what we've read is the block we were supposed to read - robust contents checking

Firstly, if we introduce a mechanism that we can use to ensure what we read is something that the filesystem wrote, we can detect a whole range of exceptions that are caused in layers below the filesystem (software and hardware). The best method for this is to use a guard value that travels with the metadata it is guarding. The guard value needs to be derived from the contents of the block being guarded. Any event that changes the guard or the contents it is guarding will immediately trigger an exception handling process when the metadata is read in. Some examples of what this will detect are:

- bit errors in media/busses/memory after guard is calculated - uninitialised blocks being returned from lower layers (dmcrypt had a readahead cancelling bug that could do this) - zeroed sectors as a result of double sector failures in RAID5 systems - overwrite by data blocks - partial overwrites (e.g. due to power failure)

The simplest method for doing this is introducing a checksum or CRC into each block. We can calculate this for each different type of metadata being written just before they are written to disk, hence we are able to provide a guard that travels all the way to and from disk with the metadata itself. Given that metadata blocks can be a maximum of 64k in size, we don't need a hugely complex CRC or number of bits to protect blocks of this size. A 32 bit CRC will allow us to reliably detect 15 bit errors on a 64k block, so this would catch almost all types of bit error exceptions that occur. It will also detect almost all other types of major content change that might occur due to an exception. It has been noted that we should select the guard algorithm to be one that has (or is targetted for) widespread hardware acceleration support.

The other advantage this provides us with is a very fast method of determining if a corrupted btree is a result of a lower layer problem or indeed an XFS problem. That is, instead of always getting a WANT_CORRUPTED_GOTO btree exception and shutdown, we'll get a'bad CRC' exception before we even start processing the contents. This will save us much time when triaging corrupt btrees - we won't spend time chasing problems that result from (potentially silent or unhandled) lower layer exceptions.

While a metadata block guard will protect us against content change, it won't protect us against blocks that are written to the wrong location on disk. This, unfortunately, happens more often that anyone would like and can be very difficult to track down when it does occur. To protect against this problem, metadata needs to be self-describing on disk. That is, if we read a block on disk, there needs to be enough information in that block to determine that it is the correct block for that location.

Currently we have a very simplistic method of determining that we really have read the correct block - the magic numbers in each metadata structure. This only enables us to identify type - we still need location and filesystem to really determine if the block we've read is the correct one. We need the filesystem identifier because misdirected writes can cross filesystem boundaries. This is easily done by including the UUID of the filesystem in every individually referencable metadata structure on disk.

For block based metadata structures such as btrees, AG headers, etc, we can add the block number directly to the header structures hence enabling easy checking. e.g. for btree blocks, we already have sibling pointers in the header, so adding a long 'self' pointer makes a great deal of sense. For inodes, adding the inode number into the inode core will provide exactly the same protection - we'll now know that the inode we are reading is the one we are supposed to have read. We can make similar modifications to dquots to make them self identifying as well.

So now we are able to verify the metadata we read from disk is what we wrote and it's the correct metadata block, the only thing that remains is more robust checking of the content. In many cases we already do this in DEBUG code but not in runtime code. For example, when we read an inode cluster in we only check the first inode for a matching magic number, whereas in debug code we check every inode in the cluster.

In some cases, there is not much point in doing this sort of detailed checking; it's pretty hard to check the validity of the contents of a btree block without doing a full walk of the tree and that is prohibitive overhead for production systems. The added block guards and self identifiers should be sufficient to catch all non-filesystem based exceptions in this case, whilst the existing exception detection should catch all others. With the btree factoring that is being done on for this work, all of the btrees should end up protected by WANT_CORRUPTED_GOTO runtime exception checking.

We also need to verify that metadata is sane before we use it. For example, if we pull a block number out of a btree record in a block that has passed all other validity it still may be invalid due to corruption prior to writing it to disk. In these cases we need to ensure the block number lands within the filesystem and/or within the bounds of the specific AG.

Similar checking is needed for pretty much any forward or backwards reference we are going to follow or using in an algorithm somewhere. This will help prevent kernel panics by out of bound references (e.g. using an unchecked ag number to index the per-AG array) by turning them into a handled exception (which will initially be a shutdown). That is, we will turn a total system failure into a (potentially recoverable) filesystem failure.

Another failures that we often have reported is that XFS has 'hung' and traige indicates that the filesystem appears to be waiting for a metadata I/O completion to occur. We have seen in the past I/O errors not being propagated from the lower layers back into the filesystem causing these sort of problems. We have also seen cases where there have been silent I/O errors and the first thing to go wrong is 'XFS has hung'.

To catch situations like this, we need to track all I/O we have in flight and have some method of timing them out. That is, if we haven't completed the I/O in N seconds, issue a warning and enter an exception handling process that attempts to deal with the problem.

My initial thoughts on this is that it could be implemented via the MRU cache without much extra code being needed. The complexity with this is that we can't catch data read I/O because we use the generic I/O path for read. We do our own data write and metadata read/write, so we can easily add hooks to track all these types of I/O. Hence we will initially target just metadata I/O as this would only need to hook into the xfs_buf I/O submission layer.

To further improve exception detection, once guards and self-describing structures are on disk, we can add filesystem scrubbing daemons that can verify the structure of the filesystem pro-actively. That is, we can use background processes to discovery degradation in the filesystem before it is found by a user intiated operation. This gives us the ability to do exception handling in a context that enables further checking and potential repair of the exception. This sort of exception handling may not be possible if we are in a user-initiated I/O context, and certainly not if we are in a transaction context.

This will also allow us to detect errors in rarely referenced parts of the filesystem, thereby giving us advance warning of degradation in filesystems that we might not otherwise get (e.g. in systems without media scrubbing). Ideally, data scrubbing woul dneed to be done as well, but without data guards it is rather hard to detect that there's been a change in the data....


[edit] Exception Handling

Once we can detect exceptions, we need to handle them in a sane manner. The method of exception handling is two-fold:

- retry (write) or cancel (read) asynchronous I/O - shut down the filesystem (fatal).

Effectively, we either defer non-critical failures to a later point in time or we come to a complete halt and prevent the filesystem from being accessed further. We have no other methods of handling exceptions.

If we look at the different types of exceptions we can have, they broadly fall into:

- media read errors - media write errors - successful media read, corrupted contents

The context in which the errors occur also influences the exception processing that is required. For example, an unrecoverable metadata read error within a dirty transaction is a fatal error, whilst the same error during a read-only operation will simply log the error to syslog and return an error to userspace.

Furthermore, the storage subsystem plays a part indeciding how to handle errors. The reason is that in many storage configurations I/O errors can be transient. For example, in a SAN a broken fibre can cause a failover to a redundant path, however the inflight I/O on the failed is usually timed out and an error returned. We don't want to shut down the filesystem on such an error - we want to wait for failover to a redundant path and then retry the I/O. If the failover succeeds, then the I/O will succeed. Hence any robust method of exception handling needs to consider that I/O exceptions may be transient.

In the abscence of redundant metadata, there is little we can do right now on a permanent media read error. There are a number of approaches we can take for handling the exception:

- try reading the block again. Normally we don't get an error returned until the device has given up on trying to recover it. If it's a transient failure, then we should eventually get a good block back. If a retry fails, then:

- inform the lower layer that it needs to perform recovery on that block before trying to read it again. For path failover situations, this should block until a redundant path is brought online. If no redundant path exists or recovery from parity/error coding blocks fails, then we cannot recover the block and we have a fatal error situation.

Ultimately, however, we reach a point where we have to give up - the metadata no longer exists on disk and we have to enter a repair process to fix the problem. That is, shut down the filesystem and get a human to intervene and fix the problem.

At this point, the only way we can prevent a shutdown situation from occurring is to have redundant metadata on disk. That is, whenever we get an error reported, we can immediately retry by reading from an alternate metadata block. If we can read from the alternate block, we can continue onwards without the user even knowing there is a block in the filesystem. Of course, we'd need to log the event for the administrator to take action on at some point in the future.

Even better, we can mostly avoid this intervention if we have alternate metadata blocks. That is, we can repair blocks that are returning read errors during the exception processing. In the case of media errors, they can generally be corrected simply by re-writing the block that was returning the error. This will force drives to remap the bad blocks internally so the next read from that location will return valid data. This, if my understanding is correct, is the same process that ZFS and BTRFS use to recover from and correct such errors.

NOTE: Adding redundant metadata can be done in several different ways. I'm not going to address that here as it is a topic all to itself. The focus of this document is to outline how the redundant metadata could be used to enhance exception processing and prevent a large number of cases where we currently shut down the filesystem.

TODO: Transient write error Permanent write error Corrupted data on read Corrupted data on write (detected during guard calculation) I/O timeouts Memory corruption


[edit] Reverse Mapping

It is worth noting that even redundant metadata doesn't solve all our problems. Realistically, all that redundant metadata gives us is the ability to recover from top-down traversal exceptions. It does not help exception handling of occurences such as double sector failures (i.e. loss of redundancy and a metadata block). Double sector failures are the most common cause of RAID5 data loss - loss of a disk followed by a sector read error during rebuild on one of the remaining disks.

In this case, we've got a block on disk that is corrupt. We know what block it is, but we have no idea who the owner of the block is. If it is a metadata block, then we can recover it if we have redundant metadata. Even if this is user data, we still want to be able to tell them what file got corrupted by the failure event. However, without doing a top-down traverse of the filesystem we cannot find the owner of the block that was corrupted.

This is where we need a reverse block map. Every time we do an allocation of an extent we know who the owner of the block is. If we record this information in a separate tree then we can do a simple lookup to find the owner of any block and start an exception handling process to repair the damage. Ideally we also need to include information about the type of block as well. For example, and inode can own:

- data blocks - data fork BMBT blocks - attribute blocks - attribute fork BMBT blocks

So keeping track of owner + type would help indicate what sort of exception handling needs to take place. For example, a missing data fork BMBT block means there will be unreferenced extents across the filesystem. These 'lost extents' could be recovered by reverse map traversal to find all the BMBT and data blocks owned by that inode and finding the ones that are not referenced. If the reverse map held suffient extra metadata - such as the offset within the file for the extent - the exception handling process could rebuild the BMBT tree completely without needing ænd external help.

It would seem to me that the reverse map needs to be a long-pointer format btree and held per-AG. it needs long pointers because the owner of an extent can be anywhere in the filesystem, and it needs to be per-AG to avoid adverse effect on allocation parallelism.

The format of the reverse map record will be dependent on the amount of metdata we need to store. We need:

- owner (64 bit, primary record) - {block, len} extent descriptor - type - per-type specific metadata (e.g. offset for data types).

Looking at worst case here, say we have 32 bytes per record, the worst case space usage of the reverse map btree woul dbe roughly 62 records per 4k block. With a 1TB allocation group, we have 228 4k blocks in the AG that could require unique reverse mappings. That gives us roughly 222 4k blocks to for the reverse map, or 234 bytes - roughly 16GB per 1TB of space.

It may be a good idea to allocate this space at mkfs time (tagged as unwritten so it doesn't need zeroing) to avoid allocation overhead and potential free space fragmentation as the reverse map index grows and shrinks. If we do this we could even treat this as a array/skip list where a given block in the AG has a fixed location in the map. This will require more study to determine the advantages and disadvantages of such approaches.


[edit] Recovering From Errors During Transactions

One of the big problems we face with exception recovery is what to do when we take an exception inside a dirty transaction. At present, any error is treated as a fatal error, the transaction is cancelled and the filesystem is shut down. Even though we may have a context which can return an error, we are unable to revert the changes we have made during the transaction and so cannot back out.

Effectively, a cancelled dirty transaction looks exactly like in-memory structure corruption. That is, what is in memory is different to that on disk, in the log or in asynchronous transactions yet to be written to the log. Hence we cannot simply return an error and continue.

To be able to do this, we need to be able to undo changes made in a given transaction. The method XFS uses for journalling - write-ahead logging - makes this diffcult to do. A transaction proceeds in the following order:

- allocate transaction - reserve space in the journal for transaction - repeat until change is complete: - lock item - join item to transaction - modify item - record region of change to item - transaction commit

Effectively, we modify structures in memory then record where we changed them for the transaction commit to write to disk. Unfortunately, this means we overwrite the original state of the items in memory, leaving us with no way to back out those changes from memory if something goes wrong.

However, based on the observation that we are supposed to join an item to the transaction *before* we start modifying it, it is possible to record the state of the item before we start changing it. That is, we have a hoook that can allow us take a copy of the unmodified item when we join it to the transaction.

If we have an unmodified copy of the item in memory, then if the transaction is cancelled when dirty, we have the information necessary to undo, or roll back, the changes made in the transaction. This would allow us to return the in-memory state to that prior to the transaction starting, thereby ensuring that the in-memory state matches the rest of the filesystem and allowing us to return an error to the calling context.

This is not without overhead. we would have to copy every metadata item entirely in every transaction. This will increase the CPU overhead of each transaction as well as the memory required. It is the memory requirement more than the CPU overhead that concerns me - we may need to ensure we have a memory pool associated with transaction reservation that guarantees us enough memory is available to complete the transaction. However, given that we could roll back transactions, we could now *fail transactions* with ENOMEM and not have to shut down the filesystem, so this may be an acceptible trade-off.

In terms of implementation, it is worth noting that there is debug code in the xfs_buf_log_item for checking that all the modified regions of a buffer were logged. Importantly, this is implemented by copying the original buffer in the item initialisation when it is first attached to a transaction. In other words, this debug code implements the mechanism we need to be able to rollback changes made in a transaction. Other item types would require similar changes to be made.

Overall, this doesn't look like a particularly complex change to make; the only real question is how much overhead is it going to introduce. With CPUs growing more cores all the time, and XFS being aimed at extremely multi-threaded workloads, this overhead may not be a concern for long.


[edit] Failure Domains

If we plan to have redundant metadata, or even try to provide fault isolation between different parts of the filesystem namespace, we need to know about independent regions of the filesystem. 'Independent Regions' (IR) are ranges of the filesystem block address space that don't share resources with any other range.

A classic example of a filesystem made up of multiple IRs is a linear concatenation of multiple drives into a larger address space. The address space associated with each drive can operate independently from the other drives, and a failure of one drive will not affect the operation of the address spaces associated with other drives in the linear concatenation.

A Failure Domain (FD) is made up of one or more IRs. IRs cannot be shared between FDs - IRs are not independent if they are shared! Effectively, an ID is an encoding of the address space within the filesystem that lower level failures (from below the filesystem) will not propagate outside. The geometry and redundancy in the underlying storage will determine the nature of the IRs available to the filesystem.

To use redundant metadata effectively for recovering from fatal lower layer loss or corruption, we really need to be able to place said redundant metadata in a different FDs. That way a loss in one domain can be recovered from a domain that is still intact. It also means that it is extremely difficult to lose or corrupt all copies of a given piece of metadata; that would require multiple independent faults to occur in a localised temporaral window. Concurrent multiple component failure in multiple IRs is considered to be quite unlikely - if such an event were to occur, it is likely that there is more to worry about than filesystem consistency (like putting out the fire in the data center).

Another use of FDs is to try to minimise the number of domain boundaries each object in the filesystem crosses. If an object is wholly contained within a FD, and that object is corrupted, then the repair problem is isolated to that FD, not the entire filesystem. That is, by making allocation strategies and placement decisions aware of failure domain boundaries we can constraint the location of related data and metadata. Once locality is constrained, the scope of repairing an object if it becomes corrupted is reduced to that of ensuring the FD is consistent.

There are many ways of limiting cross-domain dependencies; I will not try to detail them here. Likewise, there are many ways of introducing such information into XFS - mkfs, dynamically via allocation policies, etc - so I won't try to detail them, either. The main point to be made is that to make full use of redundant metadata and to reduce the scope of common reapir problems we need to pay attention to how the system can fail to ensure that we can recover from failures as quickly as possible.

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